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Located in the Carpathian Mountains, the Slovak Republic shares borders with Austria, the Czech Republic, Hungary, Poland and Ukraine. Water management in Slovakia is determined by its geographic position on the watershed divide between the Black and Baltic Seas. The Danube and its tributaries drain 96% of the country into the Black Sea.

Moldova is one of the smaller countries of the Danube River Basin, but the Danube touches the southern point of Moldova for about 340 meters. Picturesque Moldova holds over 12,500km² of the Danube River Basin, including 8,300km² of the Prut River Sub-Basin, 3,300km² of the Yalpugh River Sub-Basin and 900km² of the Cahul River Sub-Basin.

The Czech Republic is situated at the roof of Europe and its waters are drained through rivers into three different seas. The majority of the territory is drained by the Elbe and Oder to the North and Baltic Seas. The Morava River drains almost 28 % of the country to the Danube. Nearly 2.8 million inhabitants – around 3.46 % of the population in the Danube River Basin – live in this area.

As both the largest remaining natural wetland and second largest river delta in Europe, the Danube Delta is one of the continent's most valuable habitats for wetland wildlife. Pollution and discharge manipulation from upstream has a huge effect on this area of high biodiversity, plus the delta continues to change ecologically itself – the Danube Delta spreads seaward at a rate of 10 to 25 metres every year.